Problems with GridDataReader

Extension of Elmer in computational glaciology

Problems with GridDataReader

Postby jaime » 03 Oct 2013, 10:50

Hi all,
I'm trying to use the GridDataReader module. I first compiled it, and everything was fine ( I think so...) and so I tried to run the example provide in the module directory, case2d.sif. But I obain this error in the console log:

Code: Select all
ELMER SOLVER (v 7.0) STARTED AT: 2013/10/03 09:44:50
MAIN:
MAIN: =============================================================
MAIN: ElmerSolver finite element software, Welcome!
MAIN: This program is free software licensed under (L)GPL
MAIN: Copyright 1st April 1995 - , CSC - IT Center for Science Ltd.
MAIN: Webpage http://www.csc.fi/elmer, Email elmeradm@csc.fi
MAIN: Library version: 7.0 (Rev: 6331)
MAIN: =============================================================
MAIN:
MAIN:
MAIN: -------------------------------------
MAIN: Reading Model: case2d_copia.sif
WARNING:: LoadInputFile: Empty section given for: material 1
Model Input:  Unlisted keyword: [x dim name] in section: [solver 1]
Model Input:  Unlisted keyword: [x var name] in section: [solver 1]
Model Input:  Unlisted keyword: [epsilon x] in section: [solver 1]
Model Input:  Unlisted keyword: [interpolation bias] in section: [solver 1]
Model Input:  Unlisted keyword: [interpolation multiplier] in section: [solver 1]
Model Input:  Unlisted keyword: [is time counter] in section: [solver 1]
Model Input:  Unlisted keyword: [enable scaling] in section: [solver 1]
WARNING:: LoadInputFile: Entry missing for: Material 1
Loading user function library: [./GridDataReader]...[GridDataReader_Init0]

Load: Unable to open shared library: [./GridDataReader]
./GridDataReader: cannot open shared object file: No such file or directory

Load: Unable to open shared library: [./GridDataReader.so]
./GridDataReader.so: undefined symbol: __netcdf_MOD_nf90_inq_varid

Load: Unable to open shared library: [././GridDataReader]
././GridDataReader: cannot open shared object file: No such file or directory

Load: Unable to open shared library: [././GridDataReader.so]
././GridDataReader.so: undefined symbol: __netcdf_MOD_nf90_inq_varid

Load: Unable to open shared library: [/opt/elmer/share/elmersolver/lib/./GridDataReader]
/opt/elmer/share/elmersolver/lib/./GridDataReader: cannot open shared object file: No such file or directory

Load: Unable to open shared library: [/opt/elmer/share/elmersolver/lib/./GridDataReader.so]
/opt/elmer/share/elmersolver/lib/./GridDataReader.so: cannot open shared object file: No such file or directory


First I have the netcdf libraries from ubuntu repositories (ubuntu 12.04), but I also have compiled the libraries with the same version of gfortran that Elmer uses, but nothing better happened.

Do you have any ideas where is the problem?
Thank you
Cheers
Jaime
jaime
 
Posts: 6
Joined: 02 Sep 2010, 00:35

Re: Problems with GridDataReader

Postby rgladstone » 12 Nov 2013, 00:49

Hi Jaime, did you get an answer to this? Looks like the reader either failed to compile or wasn't in a place where ElmerSolver could find it.

Seems like my forum email alerts weren't working properly, I didn't get a notification of this post.

Rupert
rgladstone
 
Posts: 57
Joined: 15 Apr 2013, 16:23

Re: Problems with GridDataReader

Postby tzwinger » 27 Jan 2014, 15:45

Please, see the answer given under: http://www.elmerfem.org/forum/viewtopic.php?f=2&t=3240
tzwinger
Site Admin
 
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Joined: 24 Aug 2009, 12:20


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